Insertion junction: LMJ.RY0402.196707_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.196707
Chromosome:chromosome 3
Location:6177553
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g192250 PHC69 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 69 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCAGGAAGGGGCAGGGCTGGCCCGGTG
Internal bar code:GCTGGTCCAATGCCCTGCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGCCGTGTTAATGGTG
Suggested primer 2:GTCGCGTTCAAACTGAACCT