Insertion junction: LMJ.RY0402.196736_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.196736
Chromosome:chromosome 8
Location:2531615
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g372250 YDIF1,YDIF Putative soluble chloroplast ABCF protein, related to bacterial YdiF.; (1 of 1) PTHR19211//PTHR19211:SF48 - ATP-BINDING TRANSPORT PROTEIN-RELATED // ABC TRANSPORTER F FAMILY MEMBER 2-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGCTGTGGCCACAGCTGCTCTTGTTG
Internal bar code:CTAGACACCGTCGTCGTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:99.706
LEAP-Seq n confirming:4409
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGAGCAGCGAGTATTCA
Suggested primer 2:GAAGAAGAAGTGAGCGGGTG