Insertion junction: LMJ.RY0402.196767_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.196767
Chromosome:chromosome 5
Location:2616987
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTTTTGTGCAGCCGCCGGTCCGCCGCG
Internal bar code:GAAAGCCTCGGGTGCCTTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:235
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTGCTGTACGTTTTGG
Suggested primer 2:TCCAAAAGAGCAAGCAAGGT