Insertion junction: LMJ.RY0402.196767_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.196767
Chromosome:chromosome 5
Location:2616992
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTCTCAGGGTAGGGTTGGCCCGGTATGG
Internal bar code:GGTCCCCCCCCGTTCTCGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:956
LEAP-Seq percent confirming:99.5551
LEAP-Seq n confirming:2685
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTGCTGTACGTTTTGG
Suggested primer 2:TCCAAAAGAGCAAGCAAGGT