Insertion junction: LMJ.RY0402.196789_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.196789
Chromosome:chromosome 10
Location:2099562
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g433350 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACTAACGTCCACACTTCCGCTGTGTG
Internal bar code:CTACACACCTTAACGACGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:394
LEAP-Seq percent confirming:99.6841
LEAP-Seq n confirming:1578
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCGGAGTAGATAATAA
Suggested primer 2:ATGAGACCCAATCAACCAGC