Insertion junction: LMJ.RY0402.196982_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.196982
Chromosome:scaffold 19
Location:152813
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTCAAACACTTGAAGCGGGTCGACGG
Internal bar code:GCGTAAATCAAGGTGCACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:253
LEAP-Seq percent confirming:95.7768
LEAP-Seq n confirming:635
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTTTAGCGGTCTGAGC
Suggested primer 2:GGTGCGGCAAATTATCAACT