Insertion junction: LMJ.RY0402.197011_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.197011
Chromosome:chromosome 17
Location:2685912
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAGAACAATGCATGCGAGCATGCGAGC
Internal bar code:CGGTTTACTACGGACTAGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAAAGCGTTGATCTGT
Suggested primer 2:GAAACGTGGTCCTCACTGGT