Insertion junction: LMJ.RY0402.197064_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.197064
Chromosome:chromosome 2
Location:5451408
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g107700 (1 of 2) IPR001611//IPR001810//IPR003591 - Leucine-rich repeat // F-box domain // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACAGCCTGCCGCTCCTCGCCCCCGGCA
Internal bar code:TCGATTTTCGAGCTCTGCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:958
LEAP-Seq percent confirming:99.3689
LEAP-Seq n confirming:5668
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTCATGTAGCACAACGG
Suggested primer 2:TCTATGGCAGGGAGACCATC