Insertion junction: LMJ.RY0402.197143_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.197143
Chromosome:chromosome 9
Location:2669260
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g389900 HRP4 Hydroxyproline-rich glycoprotein; (1 of 1) PTHR15744//PTHR15744:SF0 - BLOM7 // UPF0469 PROTEIN KIAA0907 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCGGGAAGCACAGCAATTCGTCAGTT
Internal bar code:TGCTCCTGGATCGTCCGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:99.7291
LEAP-Seq n confirming:7732
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTTTCCGGTAGACAGC
Suggested primer 2:GCCAGGCTATCAGCTAAACG