Insertion junction: LMJ.RY0402.197378_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.197378
Chromosome:chromosome 9
Location:3439928
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389245 (1 of 1) PTHR24078//PTHR24078:SF205 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACAGCACATGTACGTCCATGAGACCGGC
Internal bar code:TGAGCGGACGGGAGTTCCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGCAGGGTTCCATGACT
Suggested primer 2:TAAATCGAGGGAACAGGTGG