Insertion junction: LMJ.RY0402.197456_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.197456
Chromosome:chromosome 2
Location:2887244
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g094900 (1 of 1) PTHR23083//PTHR23083:SF427 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCGCCTTCGCCCCGCGCCGCAGCCTCCT
Internal bar code:GCTACACTCGAATTTACACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:402
LEAP-Seq percent confirming:99.577
LEAP-Seq n confirming:1648
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGGCTTAACGCCTACTC
Suggested primer 2:GAAACGCTCAAAAGGACTGG