Insertion junction: LMJ.RY0402.197605_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.197605
Chromosome:chromosome 4
Location:3561103
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g228400 WRK1 (1 of 1) PF03106 - WRKY DNA -binding domain (WRKY); WRKY family transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCACGCCCCGACCGCAGCAGCAGTAAA
Internal bar code:GCACATCCCATGGCATTCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:22.0325
LEAP-Seq n confirming:258
LEAP-Seq n nonconfirming:913
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCACCATCACAAAGCAA
Suggested primer 2:GTGCGTCCATCCTTACACCT