Insertion junction: LMJ.RY0402.197739_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.197739
Chromosome:chromosome 17
Location:4819489
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g733950 CGL152 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTAGTCTTACAAGCATCCTCGACAACA
Internal bar code:GTCAACCACAGCACGGCGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:464
LEAP-Seq percent confirming:99.7573
LEAP-Seq n confirming:411
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCTGGTAGTTGGGAGC
Suggested primer 2:GGGTGTGGAGCATTTGAGTT