Insertion junction: LMJ.RY0402.197819_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.197819
Chromosome:chromosome 3
Location:2398474
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g159000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGGTGCGCTTTTTCCTGTTTGGACTT
Internal bar code:GAGTCACGGGCTTGCTGTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:836
LEAP-Seq percent confirming:12.2591
LEAP-Seq n confirming:159
LEAP-Seq n nonconfirming:1138
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAATGCGTTATCAGGTCC
Suggested primer 2:AGCGAGAGGATCAACAGCAT