Insertion junction: LMJ.RY0402.197974_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.197974
Chromosome:chromosome 3
Location:3565285
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g168100 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGGTCCCGTTGACTGTGCGGGTTTCG
Internal bar code:GGGCAGGACGCGGGCTGTAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:864
LEAP-Seq percent confirming:99.1533
LEAP-Seq n confirming:1171
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGTGCGTTGGTGCCTCT
Suggested primer 2:GTCTGTGGCCGTCTGGTATT