Insertion junction: LMJ.RY0402.198016_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.198016
Chromosome:chromosome 9
Location:3617273
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390282 (1 of 1) PF07851 - TMPIT-like protein (TMPIT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTCCCTCGCGTTTGACGCACGGGTACG
Internal bar code:CCGACTCATGATCTATTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGGTGGGTAACATGAAC
Suggested primer 2:AGCCGTGTTATGTTTGGGAG