Insertion junction: LMJ.RY0402.198136_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.198136
Chromosome:chromosome_3
Location:4537388
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre03.g176600 antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):ATTTGCTAGCTGCTAGTCATTCCAGCAGTC
Internal bar code:ACTTGCACCGCGCCGCGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:99.7857
LEAP-Seq n confirming:1397
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTGTGCGTGTGGTATT
Suggested primer 2:ATGGGGACATGGGATAGTCA