Insertion junction: LMJ.RY0402.198140_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.198140
Chromosome:chromosome 3
Location:4487807
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g176200 (1 of 1) PTHR22904//PTHR22904:SF364 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCACTCTTCCCGCGCCTATGTTAAAG
Internal bar code:GAATCCATAGAAGCCCTCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:807
LEAP-Seq percent confirming:99.0436
LEAP-Seq n confirming:932
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGATTGGTGCAATGAG
Suggested primer 2:CAGTAGCAGCAGTAGCAGCG