Insertion junction: LMJ.RY0402.198254_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.198254
Chromosome:chromosome 4
Location:1357301
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTGATTGCAAGGTTAAATTGGTTGTTG
Internal bar code:GGCATGGCGTTGATGGAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:297
LEAP-Seq percent confirming:99.0428
LEAP-Seq n confirming:5898
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCATGACCCATCTATCC
Suggested primer 2:CCGTGTATACGCCTCCACTT