Insertion junction: LMJ.RY0402.198328_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.198328
Chromosome:chromosome 12
Location:8380160
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g549050 STR1 Strictosidine synthase; (1 of 1) 4.3.3.2 - Strictosidine synthase / Strictosidine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGGGTACCTTCATAGTT
Internal bar code:GCGGTGGAAAGGCTACGCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:860
LEAP-Seq percent confirming:97.3358
LEAP-Seq n confirming:2667
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATTCACTCCCCATTGC
Suggested primer 2:TAAGGGAGTGGAACACGAGG