Insertion junction: LMJ.RY0402.198553_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.198553
Chromosome:chromosome 3
Location:6709462
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g197600 (1 of 1) PTHR12972//PTHR12972:SF0 - DOWNSTREAM NEIGHBOR OF SON // PROTEIN DOWNSTREAM NEIGHBOR OF SON 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGGCAAGTGCGGCGTGCGAGAGCGTGC
Internal bar code:TATAGGGTTTGTCTCCATAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:536
LEAP-Seq percent confirming:99.2578
LEAP-Seq n confirming:7890
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AACCAGTGAGGTGGAGGTTG
Suggested primer 2:CAGGACAAGACAGGGTTGGT