Insertion junction: LMJ.RY0402.198575_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.198575
Chromosome:chromosome 12
Location:4073260
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g517700 NYC1,SDR21 (1 of 2) K13606 - chlorophyll(ide) b reductase (NOL, NYC1); Chlorophyll b reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATAGGCGGGGAGCACCACAGCACCGAG
Internal bar code:AAGGTGGTCGGGCAACAGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1155
LEAP-Seq percent confirming:99.4152
LEAP-Seq n confirming:9690
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACGATGACGTCCTTTGGTT
Suggested primer 2:CAGGTCAGGAGGTAGAAGCG