Insertion junction: LMJ.RY0402.198605_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.198605
Chromosome:chromosome 5
Location:1968358
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g241638 (1 of 1) IPR000253//IPR002562//IPR012337 - Forkhead-associated (FHA) domain // 3'-5' exonuclease domain // Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACCTAGAATTGCTGTGCGGCCAGAACG
Internal bar code:AGCACTGCATCCCCTTGATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTATCCAGCTTCCCCC
Suggested primer 2:AAGTGTGGCCTTTCTCCTGA