Insertion junction: LMJ.RY0402.198774_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.198774
Chromosome:chromosome 3
Location:3663661
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g169000 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGTGCGCGTGCGTGCATGCGTGCATT
Internal bar code:CGCCAGTGAATGTTAAGCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:99.3476
LEAP-Seq n confirming:4264
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTAATGCAGTCAGAGCCGTG
Suggested primer 2:GAGCGCAAGGAATACAAAGC