Insertion junction: LMJ.RY0402.198839_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.198839
Chromosome:chromosome 9
Location:3683031
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g390801 (1 of 1) PTHR11918//PTHR11918:SF77 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCCAGGTAGAGCTGCGGGTGTAGGGT
Internal bar code:TAGCGTATCGTCGGGTAAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:675
LEAP-Seq percent confirming:99.8533
LEAP-Seq n confirming:6806
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCAATGTACCACTCCA
Suggested primer 2:CGGTACCAGCCCAAACTAAA