Insertion junction: LMJ.RY0402.198883_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.198883
Chromosome:chromosome 4
Location:1719038
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g212500 CGL42 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGCAATCTGCAAGAACATGGAAGGCCA
Internal bar code:CATGATGGGTCCAGCAAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:99.6496
LEAP-Seq n confirming:5688
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGAGGACGATGGGACAC
Suggested primer 2:CGCATTAGGCTAGCTGTTCC