Insertion junction: LMJ.RY0402.198961_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.198961
Chromosome:chromosome 9
Location:3785682
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g391467 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCCAGGCCTGATACACGGTGCAGGGGA
Internal bar code:TCAGCGGACCGCTTGGCACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:318
LEAP-Seq percent confirming:99.6065
LEAP-Seq n confirming:5063
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACGACTACTTCGACCAGCA
Suggested primer 2:AGCAAGACATTAGCACCGCT