Insertion junction: LMJ.RY0402.198999_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.198999
Chromosome:chromosome 3
Location:6081813
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g191500 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTCTGCTGGCTGGCAAAGCTGCCACTC
Internal bar code:GAGTCCAGAACATTTAACCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:96.8694
LEAP-Seq n confirming:8664
LEAP-Seq n nonconfirming:280
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTGTACGTGCCTCCACA
Suggested primer 2:AAGGTAAGCAAAGCGCAAAA