Insertion junction: LMJ.RY0402.199139_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.199139
Chromosome:chromosome 3
Location:2725611
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g161578 (1 of 6) IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACGACCATCAGCAGTGAGGACCTGCTG
Internal bar code:GTCCGGAAAGTAGCCAGCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:99.663
LEAP-Seq n confirming:2070
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGAATCAAGGTGACCAG
Suggested primer 2:CCCTTTGTATGTGGGGTTTG