Insertion junction: LMJ.RY0402.199231_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.199231
Chromosome:chromosome 12
Location:3532119
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g513300 CGL23 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGGAGGAGGAGCGCGCCATAAAGCGG
Internal bar code:ATGCGCCCCCCGTGGTGTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:97.4252
LEAP-Seq n confirming:6281
LEAP-Seq n nonconfirming:166
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAGCACAACGGTATGAA
Suggested primer 2:CCGTGTCGATCCTCAACTTT