Insertion junction: LMJ.RY0402.199250_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.199250
Chromosome:chromosome 2
Location:1714622
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g086100 CGL40 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCATAGTGACGTTTGACGCACGGAATG
Internal bar code:AAGAGTTTGTTCCGAGCAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:99.7736
LEAP-Seq n confirming:1763
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGACGTCCAGTGATGA
Suggested primer 2:ATACGACACAGGTTGAGCCC