Insertion junction: LMJ.RY0402.199270_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.199270
Chromosome:chromosome 1
Location:1055407
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g006150 EFG9,PRFC1, PRFC1,PRF3 (1 of 1) PTHR23115//PTHR23115:SF69 - TRANSLATION FACTOR // PEPTIDE CHAIN RELEASE FACTOR 3; Putative chloroplast translation peptide-chain release factor 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAACCCACACCTCCCACTCACCCGCCT
Internal bar code:GTGGTTATATACACGCGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:99.0476
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTTAGTTTGGGCTGG
Suggested primer 2:ACACACACACACACACACCG