Insertion junction: LMJ.RY0402.199352_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.199352
Chromosome:chromosome 10
Location:3259970
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g443100 (1 of 1) IPR001214//IPR023220 - SET domain // Type IV secretion system, VirB5-domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACAAACTGCCGCATCAGGCCGGTCAGG
Internal bar code:AGGGACTGCCTGACGAAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:0.267943
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5211
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCATTCACAACCACAC
Suggested primer 2:GTCTTTCTCGCCAAGTACCG