Insertion junction: LMJ.RY0402.199507_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.199507
Chromosome:chromosome 14
Location:2019361
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g621700 MMP31 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCACCATTTTCGCTCGCACCTCATCTTA
Internal bar code:CTGAAACGAATTGATTAGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:134
LEAP-Seq percent confirming:34.6875
LEAP-Seq n confirming:222
LEAP-Seq n nonconfirming:418
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCGCTTCTGAGGAAAAC
Suggested primer 2:GCGAGTGGCTACCGTATCAT