Insertion junction: LMJ.RY0402.199560_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.199560
Chromosome:chromosome 8
Location:2396891
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g371000 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCAGGATATAGGCCTTTGTCGCAGTT
Internal bar code:TCTTCGGGTTATCTTTCATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:87.3333
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGACAAGAAGCTCCCGTGAA
Suggested primer 2:TGCTCCAACAGATCTGCAAC