Insertion junction: LMJ.RY0402.199561_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.199561
Chromosome:chromosome 1
Location:6860962
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g049600 CGLD22 (1 of 1) K02116 - ATP synthase protein I (atpI); Assembly factor for chloroplast ATPase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACCAGTTGAGCATTGGCCCAGCCCAGA
Internal bar code:TACCACCGCCCAGGCACGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:93.5106
LEAP-Seq n confirming:1758
LEAP-Seq n nonconfirming:122
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCATGGGGTAAGAACC
Suggested primer 2:GATGAACTCGGGCTTGTAGC