Insertion junction: LMJ.RY0402.199596_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.199596
Chromosome:chromosome 13
Location:2008838
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g576740 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTAGCGTCCTATGGCATTGACCGCACGC
Internal bar code:CCAGGGGCCGCCCCGCGGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:654
LEAP-Seq percent confirming:96.9404
LEAP-Seq n confirming:1204
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGGGTGAGTCCACTTT
Suggested primer 2:CCAGCTGAACAATAGCGACA