Insertion junction: LMJ.RY0402.199597_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.199597
Chromosome:chromosome 8
Location:2178027
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g369600 MFT2,MAE2,MFT2 MATE efflux family protein; (1 of 1) IPR000104//IPR002528//IPR029303 - Antifreeze protein, type I // Multi antimicrobial extrusion protein // Polysaccharide biosynthesis protein, C-terminal domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGGGTGCGAGTGGACATTCCCGAGTG
Internal bar code:ACCATCGCGTATCATACAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:99.3797
LEAP-Seq n confirming:801
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGACTGCCGTGCTACT
Suggested primer 2:GCCGGTACTGGATTGGTAGA