Insertion junction: LMJ.RY0402.199712_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.199712
Chromosome:chromosome 3
Location:7972432
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAGCCGTACGGCTGAATGTTGCTAGGT
Internal bar code:TTGAGCCCTGAATGGGAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:762
LEAP-Seq percent confirming:99.705
LEAP-Seq n confirming:676
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCGACATTGCCTCATTC
Suggested primer 2:CCTGTGATAGCCTGATGGGT