Insertion junction: LMJ.RY0402.199937_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.199937
Chromosome:chromosome 14
Location:1942846
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g621100 (1 of 1) IPR000104//IPR001810//IPR025886 - Antifreeze protein, type I // F-box domain // Phloem protein 2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTCTGATATGCGTGGGAGCAGTTGCAG
Internal bar code:AAAGGAGGATCGTCTTTACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:99.512
LEAP-Seq n confirming:2039
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCCTATGGTATTTCGTT
Suggested primer 2:TGTGGTCTGCTTCAGGTCAG