Insertion junction: LMJ.RY0402.200175_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.200175
Chromosome:chromosome 9
Location:4710023
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397031 (1 of 6) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTAAAGTGACACGACCCTTCCGCGGCG
Internal bar code:AGATCCAGACAGCGGGGGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:253
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAACATCACCTGGGTAAGCG
Suggested primer 2:CTGGCATACAAGTGTGTGGG