Insertion junction: LMJ.RY0402.200203_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.200203
Chromosome:chromosome 7
Location:2956593
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g332901 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGCTGGACGCAGGTGCTGGTGGGCAT
Internal bar code:TGAATAGGTACGATAGAAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:508
LEAP-Seq percent confirming:99.7338
LEAP-Seq n confirming:3372
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCATCGAGTTTGGCTGTG
Suggested primer 2:TGTAGGTGACCTCGTTGCAG