Insertion junction: LMJ.RY0402.200245_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.200245
Chromosome:chromosome 4
Location:1789586
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g212050 (1 of 2) IPR000104//IPR000253//IPR008984 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // SMAD/FHA domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTATAGTTGTAGCACTAGCACGGATAA
Internal bar code:CTAGGCGAACTATTAAGGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:99.639
LEAP-Seq n confirming:3588
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATCGCGAGAGTGTCAG
Suggested primer 2:GTGTTGGTGGAGTGTTGGTG