Insertion junction: LMJ.RY0402.200303_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.200303
Chromosome:chromosome 17
Location:5227562
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g735850 (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACGCAACCACGGCGATGCCGTACCAT
Internal bar code:CTCTCCTGACTGCGACGACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:482
LEAP-Seq percent confirming:99.5948
LEAP-Seq n confirming:2458
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACTCCGGCATAACAACT
Suggested primer 2:AATGTAGGTCGCCGTGTAGG