Insertion junction: LMJ.RY0402.200485_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.200485
Chromosome:chromosome 14
Location:2387391
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGTCTGTGAAGCCAGTGTCCCACCCT
Internal bar code:GGGGCCAACGACGGTGTGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:99.179
LEAP-Seq n confirming:604
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGAGACGTATGGGTTGC
Suggested primer 2:TCGTGTGAAGCTGTTTGGAG