Insertion junction: LMJ.RY0402.201037_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.201037
Chromosome:chromosome 7
Location:6137155
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g355800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCCGTCTTCGCCCCGCCGCCCCCTCG
Internal bar code:ATTGCCGGTACAACGAGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:248
LEAP-Seq percent confirming:89.2514
LEAP-Seq n confirming:465
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGGCCTGTAACTGTCAT
Suggested primer 2:CCCCACTCGTACTGGAGGTA