Insertion junction: LMJ.RY0402.201153_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.201153
Chromosome:chromosome 11
Location:1309270
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTAGGCCCTGTGACGTCCCTGTCCCTA
Internal bar code:GGCCGATGCTTTAGGTGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:26
LEAP-Seq percent confirming:57.5
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAAGCTCCAAGAGATGC
Suggested primer 2:GCTCGTAGGCCTGAGATTTG