Insertion junction: LMJ.RY0402.201178_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.201178
Chromosome:chromosome 13
Location:1265773
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g570700 CHI7,CHI4 (1 of 1) IPR001002//IPR001223//IPR011583//IPR017853//IPR029070 - Chitin-binding, type 1 // Glycoside hydrolase family 18, catalytic domain // Chitinase II // Glycoside hydrolase superfamily // Chitinase insertion domain; Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGCAACTCCCGGCATCGGCCTTCGCCC
Internal bar code:TCGGTTCGCGGGATAATGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:98.1284
LEAP-Seq n confirming:4509
LEAP-Seq n nonconfirming:86
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCAGAACTGGTCCTCAG
Suggested primer 2:CGGTAGTCCCGACATGAGTT