Insertion junction: LMJ.RY0402.201288_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.201288
Chromosome:chromosome 13
Location:456869
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGATAGGTGCGGACGTCAGAATCAGGCA
Internal bar code:CGCGCAGTTATCTCGCAGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:319
LEAP-Seq percent confirming:99.6123
LEAP-Seq n confirming:8992
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGTACATACACCCACAC
Suggested primer 2:TCCAATCCTCTCTTCCCCTT