Insertion junction: LMJ.RY0402.201439_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.201439
Chromosome:chromosome 1
Location:4830870
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g033500 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCACCGCACGCACCTGCCCCGCCACCGC
Internal bar code:GAGAGAAAAGAAACTCCGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:945
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGAGCGTAGCGGCATGT
Suggested primer 2:GTTGCAAGCGATAATGCTCA